Friday, December 18, 2020

Favorite Books of 2020

The only plus to a pandemic is more time for reading! 

Favorite books read in 2020:

  • The Custard Protocol series (Prudence, Imprudence, Competence, Reticence), Gail Carriger – fiction, steampunk/vampires/werewolves/dirigibles.
  • Untamed, Glennon Doyle – memoir and empowerment.
  • Around the World in 80 Trees, Jonathan Drori – nonfiction, an ode to trees, with gorgeous illustrations. Did you know there is a tree called the Sève Bleue, which concentrates nickel in its sap, making the sap a crazy turquoise color? It’s being looked at for phytoremediation, using plants to remove toxic metals from the environment.
  • Curators: Behind the Scenes of Natural History Museums, Lance Grande – nonfiction by a paleontology curator at the Field Museum in Chicago.
  • The Relentless Moon, Mary Robinette Kowal – fiction, #3 of the Lady Astronaut series, alt-history/space travel/post-apocalyptic.
  • The Stand, Stephen King – fiction, one of the three best pandemic stories ever (along with Wanderers by Chuck Wendig and World War Z by Max Brooks).
  • Archaeology from Space, Sarah Parcak – nonfiction, using satellite imagery and remote sensing to discover thousands of new archaeological sites (Egyptian, Viking, Maya, etc.) and to combat looting and antiquities trafficking.
  • Lovecraft Country, Matt Ruff – fiction, horror/sci-fi/racial injustice.
  • Monarchs of the Sea, Danna Staaf – nonfiction, extinct and extant cephalopods and why they’re cool.
  • The Book of Eels, Patrik Svensson – nonfiction about eels! Yes, eels! Science, history, mythology, and memoir.
    I heart cephalopods

Wednesday, December 16, 2020

My dog's cancer, Part II

I recently posted about Pippin's jaw cancer (fibrosarcoma). Unfortunately, he started declining and I made the hard decision to euthanize him on December 4. I'm still glad I pursued the mandibulectomy, because it gave him 9 happy months. He had a good summer and fall, going camping in the mountains, keeping our neighborhood safe from cats, bossing around the workers replacing our neighbors' roof, and hunting/eating grasshoppers in the yard.

Pippin Corgi, May 2, 2008 - December 4, 2020

Sunday, November 22, 2020

My dog's cancer

Here’s a post about modern veterinary medicine and surgery, featuring my own dog, Pippin. Pippin is a 12-year-old neutered male Pembroke Welsh Corgi. Back in January 2020 I had him at work for a “dental.” I put that term in quotes; many pet owners and veterinary professionals use “dental” as a noun to describe a full dental procedure under anesthesia. But we’re trying to get away from using that term and instead using a term that more fully describes the procedure. At my hospital we call it an Oral ATP = oral assessment, treatment, and prevention. Other terms/acronyms are COHAT = complete oral health assessment and treatment, or OAT = oral assessment and treatment. Regardless of what you call it, it involves putting the pet under general anesthesia with an endotracheal tube in the trachea to provide ventilation and protect the airway, full-mouth radiographs (x-rays), scaling off the calculus (tartar), probing around each tooth for periodontal (gum) disease, and polishing the teeth.

 

Some places offer what’s called a “non-anesthetic dental” or NAD, but I do not recommend those. Basically it involves a technician scaling and polishing the teeth with the pet awake. The American Animal Hospital Association and the American Veterinary Dental College have both taken positions against NAD’s. When I talk to pet owners about NAD’s, I make these points:

  • I hate going to the dentist. Scaling and polishing makes my anxiety spike and my head hurt. I’m a human and understand why I need to go to the dentist—pets don’t understand why they’re being held and someone is poking their mouth.
  • Even the calmest pet will not allow full-mouth radiographs (x-rays) awake. Radiographs are absolutely necessary to look for pathology under the gumline, like abscesses, fractures, congenital abnormalities, or tumors.

 

Which brings us back to Pippin. His mouth looked fine; in the photo he is missing the upper tooth because he fractured it years ago and I extracted it. 



But on Pippin’s radiographs, I saw this splotchy black spot in the jaw around his lower left second and third molars (equivalent to our wisdom teeth).




My doctor brain and my pet owner brain started panicking.

Maybe it’s a congenital cyst? No, I’ve done radiographs on him multiple times in the past and that was never there before.

Maybe it’s an abscess? No, the black splotches are more diffuse and between the teeth, not centered around the tip of the root like an abscess would be.

Ugh, I think it’s cancer.



So I extracted the middle tooth and the surrounding bone and sent the chunk to the pathologist. The biopsy results came back as a sarcoma, or cancer. I took Pippin to a local specialty veterinary hospital where a board-certified veterinary dentist evaluated him. She did a CT scan of his head to see the extent of the tumor. These pictures show a generic dog skull with the location of the tumor in purple. The orange is the extent of the jaw that needed to be removed. 





Any time veterinarians or physicians are doing surgery to remove a cancer, you need to remove a margin of what appears to be normal tissue on all sides of the tumor. The reason for that is that cancer can be like an octopus—the tumor that you see with your eyes or x-rays or CT is the body of the octopus, but microscopic tumor cells can extend out like the arms of the octopus. To make sure you remove the entire tumor, you have to take at least a half-inch of healthy tissue on every side. In Pippin’s case, that meant such a large chunk behind the tumor that there was no point in leaving the ramus of the mandible, the part of the jaw that takes a left turn up to the joint with the skull.


A week or two later, Pippin had a caudal mandibulectomy. His surgeon removed the whole back half of his jaw and sutured the soft tissues together. He spent the night at the specialty hospital on heavy pain management. He was pretty sad for a couple days after coming home, with some swelling and oozing. The final biopsy report on the jaw was a fibrosarcoma, a potentially malignant cancer with a small (<20%) chance of metastasizing to other areas of the body.

First night home, in the "cone of shame"

To access the whole jaw and TMJ joint, his surgeon had to cut back from the corner of his mouth and then suture it back together.


A month after surgery, back to chewing on sticks!

Because there isn't actually any bone attachment on his left side, sometimes his jaw slides over to the side because of scar tissue. In this photo, you can see that his bottom jaw doesn't line up with his upper jaw. But the jaw only slides when he's being lazy; he can move it back into position when he wants to chew on a toy or eat dinner.

So far, so good! Here's Pippin on a family camping trip in August 2020. He's still feeling well now in November 2020.

Friday, November 20, 2020

Moab Dinosaur Tracks

Moab, Utah, is Dinosaur Central. We got down there again in October, despite the pandemic (Moab is under mask orders, and people were pretty good about social distancing on trails), and visited a few more dinosaur tracksites.

The Moab Area Travel Council has great info on area dino attractions (there are many). Descriptions of how to find the tracks are from their site.

Poison Spider Tracksite:

From the center of Moab, travel north on Hwy 191 for 5.9 miles and turn left on Hwy 279. Continue 6 miles to the Poison Spider trailhead. Parking lot is up on the top of the hill.


From the parking lot there is a short hike up the hill to a spot where a large slab has fallen off its opposite, showing theropod (3-toed dinosaur) tracks. The upper face has indentations from the footprints, while the lower face has raised molds where sediment filled in the actual tracks and then fossilized. The tracks were left by small (turkey-sized) and large (5’ tall at the hip) two-legged, meat-eating dinosaurs walking along a lakeshore 190 million years ago in the Jurassic.

The upper face, with the direct footprints.

Detail of the footprints.

The lower face, which is actually the rock layer which overlaid the tracks.


Willow Springs Tracksite:

From Moab, go north on Hwy 191 for 12 miles. Turn right onto the Willow Springs Road, off US Highway 191. 1.4 miles – take the left fork to Willow Springs. 1.7 miles – stay right on the main road and continue straight towards the Klonzo Trails area. 2.9 miles – stay right. 3.4 miles – arrive at tracksite.


Be cautious driving to this site; the unpaved road crosses a large sandy wash that will be dangerous after rains.


This is an older exposure, so some of the tracks are fairly weathered, but they are still easy to see. There are tracks from theropods (two-legged meat eaters), sauropods (big long-necked herbivores), and ornithopods (smaller herbivores). The tracks date to 165 million years ago.

Sauropod track

Trackway with geologist for scale.

Theropod track

Two crossing trackways


Bull Canyon Overlook Tracksite:

From Moab, go north on US Hwy 191 for 2.5 miles to the intersection of UT-128 (River Road). Turn right and head east 15.5 miles. At the La Sal Loop Road intersection (turn to Castle Valley) turn right and continue 10.7 miles. Continue on this road (FR207), do not follow the La Sal Loop Road signs when they turn right (southwest). Continue 5.4 miles passing the signs for Fisher Mesa. Approximately ½ mile beyond the Fisher Mesa turn park in the lot on the left (northeast) just before the road turns to dirt.


This site is up in the forested mountains of Manti-La Sal National Forest. Getting there is over an hour’s drive, but it’s worth it. The short trail is immediately adjacent to the parking lot. Some of the tracks are on the top of a thousand-foot cliff, making it look like the huge dinosaur just ran straight off the cliff to plummet to his doom. Of course, the landscape was different 200 million years ago—he walked along a sandy shore, and only later did the rocks uplift.

It looks like this big theropod just ran right off the cliff.

Theropod track (huge!) with my foot for scale.

Big trackway; each track is about four feet apart.



Sunday, October 25, 2020

Antarctic Dinosaurs

Antarctic Dinosaurs


If you get a chance to see this traveling exhibit, do so! It was developed by the Field Museum in Chicago and the Natural History Museum of Los Angeles. It is currently in residence at the Natural History Museum of Utah.

 

The whole idea that dinosaurs once stomped around Antarctica sort of blows my mind. Of course, it was warmer in the Jurassic and Cretaceous, but it was still dark for three months of the year. This exhibit features discoveries from various Antarctic expeditions over the last century, with techniques, equipment, video footage, reconstructed critters, and mounted skeletons.


Okay, this doesn't look like much but it's a fossil tree, Glossopteris. The ill-fated Terra Nova expedition of 1910-1913 carried 40 pounds of fossils along even as they were dying of exposure and starvation, because of the importance of these fossils. This tree was spread across Pangea and proves continental drift--Antarctica was once attached to South America, Africa, and Australia.


Reuniting Pangea

Kryostega skull


Posing with Antarctosuchus, a really big carnivorous amphibian (245 million years ago)
 
Smiling Antarctosuchus

Lystrosaurus, a proto-mammal that survived the end-Permian mass extinction

Cryolophosaurus (cryo = ice, lopho = crest, saurus = lizard) had a funny crest crosswise across its forehead. It's thought that they used it for species signaling to mates or rivals.


Cryolophosaurus

Me and my pal, Cryo

Cryolophosaurus lived in Antarctica ~190 million years ago. It wasn't as cold then, but still chilly and dark for three months of the year.

CT scan of the skull reveals the braincase and size/shape of brain regions.


"Sauropodomorph A" hasn't officially been named yet but was an early version of long-necked dinos.


Jumble of "Sauropodomorph A" bones that are too fragile to extract from the stone matrix, but they were CT scanned and then...


...3D printed from the CT scan to reconstruct the skeleton.



Monday, August 31, 2020

Fossil Teeth

Fossil Teeth

A big part of my "real" job as a veterinarian is dentistry, so I tend to be a little obsessed with teeth of extinct and extant species.

From the Natural History Museum of Utah

Mammuthus columbi, Columbian mammoth

Smilodon fatalis, the saber-tooth cat

Bison latifrons, Giant bison

Canis dirus, the dire wolf, a very good pupper

Paramylodon harlani, Giant sloth

Uintatherium

This is just the right front part of the maxilla of Arctodus, the giant short-faced bear. That canine tooth is 2-3 inches long. Unlike modern bears, these guys were built for running!

Top = Mammut americanum, American mastodon
Bottom = Mammuthus sp., mammoth
Interestingly, when people first found mastodon teeth, with the big crowns as opposed to the flat grinding surface of mammoth (and modern elephant) teeth, they thought mastodons were carnivores (and thought they were still alive). That's just what 2020 America needs--carnivorous elephants.


From the Museum of Ancient Life

Dimetrodon, my favorite not-a-dinosaur (they lived way before the dinosaurs, and were synapsids--proto-mammals)

Another smiling Smilodon

Basilosaurus, a proto-whale

Mammoth jaw


Sunday, August 9, 2020

Bone Cancer in a Dinosaur

Centrosaurus with Osteosarcoma :(

A new report out documents osteosarcoma, a painful bone cancer, in a Centrosaurus specimen from Alberta (a four-legged horned herbivorous dinosaur related to Triceratops). Smithsonian article here.

Cool paleoart by @usikpaleoart on Twitter

Tuesday, May 19, 2020

Book shopping

Just as carbs consumed during quarantine don’t count, books purchased during quarantine don’t count! Here’s my latest stash, supporting three local indie bookstores.